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R2
R2
  • Introduction
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  • Pheweb Browser
    • Getting started
    • Phenotype list
    • GWAS overview
    • Locus zoom
    • Variant view
    • Gene view / LoF burden
  • Methods
    • Participating biobanks/cohorts
    • Genotypes
      • Genotype data
      • Genotype imputation
      • SISu reference panel
      • Software used
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    • GWAS
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      • Association tests
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    • Loss of function burden
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  1. Pheweb Browser

Locus zoom

PreviousGWAS overviewNextVariant view

Last updated 5 years ago

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  • FinnGen association locus zoom plot

  • Annotation with GWAS catalog variants + UK Biobank hits

  • ClinVar annotation

Details

  • URL locus zoom: http://r2.finngen.fi/region/endpoint/CHR:START-END, e.g. http://r2.finngen.fi/region/J10_ASTHMA_EXMORE/5:132261855-132661855 (CHR: chromosome on hg38,START/END: window start and end position on hg38)

  • For chromosome X, use either X or 23.