LD estimation

The BCOR files were created using LDstore from the Finnish SISU panel v3.

The panel has been divided per chromosome. For example, to use the LD information in the first chromosome, FG_LD_chr1.bcor would be the file to use.

Settings used

• number of samples: 3775

• window size: 1500 kb

• accuracy: low

• number of threads: 96

• LD threshold to include correlations: 0.05

Example usage

can be downloaded via:

And an example to extract variant range 20 Mb - 50 Mb from chromosome 7 is as follows: