We used the SAIGEarrow-up-right (r3 release) software for running the R3 GWAS.
SAIGEarrow-up-right is a mixed model logistic regression R/C++ package, able to account for related samples.
We analyzed:
1,801 endpoints
135,638 samples
16,962,023 variants
We included the following covariates in the model: sex, age, 10 PCs, genotyping batch.
Last updated 5 years ago
