Minimum phenotype data (before R11)
Last updated
Last updated
This page has been last updated for R11.
This data file was replaced by the minimum extended phenotype data file in Data Release 11.
The minimum phenotype data file is available as a separate file in the following Sandbox directory:
/finngen/library-red/finngen_R[RELEASE]/phenotype_1.0/
This data is available in the following file:
data/finngen_R{RELEASE]_minimum_1.0.txt.gz
The file contains the following columns:
Column
Description
FINNGENID
Sample ID
BL_YEAR
Year of DNA sample collection
BL_AGE
Age at DNA sample collection (years)
SEX
Gender (male/female/NA)
HEIGHT
Height (cm)
HEIGHT_AGE
Age at height measurement (years)
WEIGHT
Weight (kg)
WEIGHT_AGE
Age at weight measurement (years)
SMOKE2
Smoking status 2-categories (yes/no)
SMOKE3
Smoking status 3-categories (current/former/never)
SMOKE5
Smoking status 5-categories (current/occasional/quitter/former/never)
SMOKE_AGE
Age at the moment of the smoking survey (years)
regionofbirth
Regional councils numbers for region of birth according to Finnish Minister of the Interior (21-categories)
regionofbirthname
Name of the region of birth (21-categories) (1-Uusimaa 2- Varsinais-Suomi 4-Satakunta 5-Kanta Häme 6-Pirkanmaa 7-Päijät Häme 8-Kymenlaakso 9-South Karelia 10-Etelä Savo 11-Pohjois Savo 12-North Karelia 13-Central Finland 14-South Ostrobothnia 15-Ostrobothnia 16-Central Ostrobothnia 17-North Ostrobothnia 18-Kainuu 19-Lapland 20-Åland 200-Abroad 9999-Region ceded to Soviet)
moveabroad
If the person has moved abroad 3-categories (yes/no/NA)
NUMBER_OF_OFFSPRING
Number of biological children