Sandbox path and pipeline mappings

Sandbox IVM	Sandbox pipelines	Description
/finngen/library_green/	LIBRARY_GREEN/ ; gs://finngen-production-library-green/	FinnGen's core analysis results, summary data, anonymous data
/finngen/library_red/	LIBRARY_RED/ ; gs://finngen-production-library-red/	Phenotype, Genotype data, individual-level data
/finngen/green/	SANDBOX_GREEN/ ; gs://fg-production-sandbox-<No. sandbox>_green/	Researchers' own uploaded data
/finngen/red/	SANDBOX_RED/ ; gs://fg-production-sandbox-<No. sandbox>-red/	Researchers' own analysis results, the organization's own "red" bucket
/finngen/pipelines/	SANDBOX_PIPELINE/ ; gs://fg-production-sandbox-<No. sandbox>-pipeline/	Pipeline results
/home/ivm	NA	Home disk. Users' personal data and scripts
/finngen/shared/	LIBRARY_SHARED/ ; gs://finngen-production-library-shared/	Shared data between all Sandboxes (organizations)

Replace <No.sandbox> with the number of your Sandbox. You can check your Sandbox number and buckets paths from the buckets.txt file at the Sandbox desktop see Navigating the Sandbox.

Note that the greendownloads or the greenuploads buckets are not accessible from the Sandbox.

You may also check the gs:// path for red and pipeline buckets in the terminal using the echo command. For example

echo $RED_BUCKET

echo $PIPELINE_BUCKET

and use $RED_BUCKET and $PIPELINE_BUCKET to refer those paths. For example

gsutil cp file_to_copy.txt $RED_BUCKET/username

If the folder /username doesn't exist yet the gsutil cp command will create it.