Select FinnGen data release in Atlas for Search
Last updated
Last updated
Atlas contains several FinnGen data releases. Please follow these instructions to define the FinnGen data release used in the Search and when defining Concept Sets using the Search functionality**.**
The Search is made against the vocabularies (codes) from one FinnGen data release while the number of matching records is shown for a potentially different FinnGen data release. These FinnGen data releases can be defined on the Configuration page using the Vocabulary Version and Record Counts columns.
Use the same FinnGen data release to define Concept Sets and generate Cohort Definitions.
Use the latest FinnGen data release unless you have a specific reason to use an older release.
Follow these instructions to select the FinnGen data release used in Search for vocabularies (codes) and for record counts:
Select the Configuration option on the left menu:
Select the FinnGen data release for codes from the Vocabulary Version column (the FinnGen release is shown in the Source Name column). This is the FinnGen data release from where the codes are selected for the Search.
Select the FinnGen data release for record counts from the Record Counts column (the FinnGen release is shown in the Source Name column). This is the FinnGen data release against which the codes are searched.
In the above screenshot, we have selected the "FinnGen CDM R10" (FinnGen data release 10) for both.
Make sure you have selected the Vocabulary Version and the Record Counts on the same row so that Search will show medical codes and counts from the same FinnGen Release.
